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"CVCL_DG46", "category": "Cell line databases/resources", "database": "Cellosaurus", "label": "CHSE-EC", "url": "https://www.cellosaurus.org/CVCL_DG46" } ], "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Whole embryo", "xref-list": [ { "accession": "UBERON_0000922", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0000922", "label": "embryo", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000922" } ] } } ], "entry-version": "3", "genetic-integration-list": [ { "method": "Transfection", "xref": { "accession": "P00552", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/P00552", "label": "Klebsiella pneumoniae transposon Tn5 neo", "url": "https://www.uniprot.org/uniprotkb/P00552/entry" } }, { "method": "Transfection", "xref": { "accession": "P00557", "category": "Sequence 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"https://www.uniprot.org/uniprotkb/A0A8C7HVT8/entry" } } ], "last-updated": "2025-08-14", "name-list": [ { "type": "identifier", "value": "CHSE-EC-PKR-C19" }, { "type": "synonym", "value": "EC-PKR-C19" } ], "reference-list": [ { "resource-internal-ref": "PubMed=39058317" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "74940", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_74940", "label": "Oncorhynchus tshawytscha (Chinook salmon)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=74940&lvl=3" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_E3AF" } ], "age": "Embryo", "category": "Spontaneously immortalized cell line", "cell-type": { "value": "Epithelial cell", "xref": { "accession": "CL_0000066", "category": "Anatomy/cell type resources", "database": "CL", "iri": "http://purl.obolibrary.org/obo/CL_0000066", "label": "epithelial cell", "url": 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As this particular clone is not KO for eif2ak2 it is used as a control cell line (PubMed=39058317)" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2024-09-10", "derived-from": [ { "accession": "CVCL_DG46", "category": "Cell line databases/resources", "database": "Cellosaurus", "label": "CHSE-EC", "url": "https://www.cellosaurus.org/CVCL_DG46" } ], "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Whole embryo", "xref-list": [ { "accession": "UBERON_0000922", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0000922", "label": "embryo", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000922" } ] } } ], "entry-version": "3", "genetic-integration-list": [ { "method": "Transfection", "xref": { "accession": "P00552", "category": "Sequence databases", "database": "UniProtKB", "iri": 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} } ], "last-updated": "2025-08-14", "name-list": [ { "type": "identifier", "value": "CHSE-EC-PKR-C28" }, { "type": "synonym", "value": "EC-PKR-C28" } ], "reference-list": [ { "resource-internal-ref": "PubMed=39058317" } ], "sequence-variation-list": [ { "mutation-description": "p.Cys11_Glu12del (c.30_35delGTGCGA)", "mutation-type": "Simple_edited", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=39058317" } } ], "variation-note": "By CRISPR/Cas9", "variation-type": "Mutation", "xref-list": [ { "accession": "A0A8C7HVT8", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/A0A8C7HVT8", "label": "eif2ak2", "url": "https://www.uniprot.org/uniprotkb/A0A8C7HVT8/entry" } ], "zygosity-type": "Homozygous" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "74940", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_74940", "label": "Oncorhynchus tshawytscha (Chinook 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"2024-09-10", "derived-from": [ { "accession": "CVCL_DG46", "category": "Cell line databases/resources", "database": "Cellosaurus", "label": "CHSE-EC", "url": "https://www.cellosaurus.org/CVCL_DG46" } ], "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Whole embryo", "xref-list": [ { "accession": "UBERON_0000922", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0000922", "label": "embryo", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000922" } ] } } ], "entry-version": "3", "genetic-integration-list": [ { "method": "Transfection", "xref": { "accession": "P00552", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/P00552", "label": "Klebsiella pneumoniae transposon Tn5 neo", "url": "https://www.uniprot.org/uniprotkb/P00552/entry" } }, { "method": "Transfection", "xref": { 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"Embryo", "category": "Spontaneously immortalized cell line", "cell-type": { "value": "Epithelial cell", "xref": { "accession": "CL_0000066", "category": "Anatomy/cell type resources", "database": "CL", "iri": "http://purl.obolibrary.org/obo/CL_0000066", "label": "epithelial cell", "url": "https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000066" } }, "child-list": [], "comment-list": [ { "category": "Characteristics", "source-list": [ { "reference": { "resource-internal-ref": "CelloPub=CLPUB00808" } } ], "value": "Adapted to grow in suspension-stirred culture (CelloPub=CLPUB00808)" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2013-05-06", "derived-from": [ { "accession": "CVCL_2780", "category": "Cell line databases/resources", "database": "Cellosaurus", "label": "CHSE-214", "url": "https://www.cellosaurus.org/CVCL_2780" } ], "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Whole 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"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=74940&lvl=3" } ], "xref-list": [ { "accession": "Q54813319", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q54813319" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_E3AL" } ], "age": "Embryo", "category": "Spontaneously immortalized cell line", "cell-type": { "value": "Epithelial cell", "xref": { "accession": "CL_0000066", "category": "Anatomy/cell type resources", "database": "CL", "iri": "http://purl.obolibrary.org/obo/CL_0000066", "label": "epithelial cell", "url": "https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000066" } }, "child-list": [], "comment-list": [ { "category": "Miscellaneous", "value": "Cell line has been lost (personal communication of Collet, Bertrand)" }, { "category": "Characteristics", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=22405879" } } ], "value": "Transfected with the pTet-Off plasmid from the Tet On/Off Clontech system and with rainbow trout Mx1 (PubMed=22405879)" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2024-09-10", "derived-from": [ { "accession": "CVCL_R886", "category": "Cell line databases/resources", "database": "Cellosaurus", "label": "CHSE-TOF5", "url": "https://www.cellosaurus.org/CVCL_R886" } ], "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Whole embryo", "xref-list": [ { "accession": "UBERON_0000922", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0000922", "label": "embryo", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000922" } ] } } ], "entry-version": "3", "genetic-integration-list": [ { "method": "Transfection", "xref": { "accession": "Q91192", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/Q91192", "label": "Oncorhynchus mykiss Mx1", "url": "https://www.uniprot.org/uniprotkb/Q91192/entry" } }, { "method": "Transfection", "xref": { "accession": "P00552", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/P00552", "label": "Klebsiella pneumoniae transposon Tn5 neo", "url": "https://www.uniprot.org/uniprotkb/P00552/entry" } }, { "method": "Transfection", "xref": { "accession": "P00557", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/P00557", "label": "Escherichia coli hygromycin-B 4-O-kinase (hph) (HygR)", "url": "https://www.uniprot.org/uniprotkb/P00557/entry" } } ], "last-updated": "2025-08-14", "name-list": [ { "type": "identifier", "value": "CHSE-TOF-MX10" } ], "reference-list": [ { "resource-internal-ref": "PubMed=22405879" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "74940", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_74940", "label": "Oncorhynchus tshawytscha (Chinook salmon)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=74940&lvl=3" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_E3AM" } ], "age": "Embryo", "category": "Spontaneously immortalized cell line", "cell-type": { "value": "Epithelial cell", "xref": { "accession": "CL_0000066", "category": "Anatomy/cell type resources", "database": "CL", "iri": "http://purl.obolibrary.org/obo/CL_0000066", "label": "epithelial cell", "url": "https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000066" } }, "child-list": [], "comment-list": [ { "category": "Characteristics", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=22405879" } } ], "value": "Transfected with the pTet-Off plasmid from the Tet On/Off Clontech system and with rainbow trout Mx1 (PubMed=22405879)" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2024-09-10", "derived-from": [ { "accession": "CVCL_R886", "category": "Cell line databases/resources", "database": "Cellosaurus", "label": "CHSE-TOF5", "url": "https://www.cellosaurus.org/CVCL_R886" } ], "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Whole embryo", "xref-list": [ { "accession": "UBERON_0000922", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0000922", "label": "embryo", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000922" } ] } } ], "entry-version": "3", "genetic-integration-list": [ { "method": "Transfection", "xref": { "accession": "Q91192", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/Q91192", "label": "Oncorhynchus mykiss Mx1", "url": "https://www.uniprot.org/uniprotkb/Q91192/entry" } }, { "method": "Transfection", "xref": { "accession": "P00552", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/P00552", "label": "Klebsiella pneumoniae transposon Tn5 neo", "url": "https://www.uniprot.org/uniprotkb/P00552/entry" } }, { "method": "Transfection", "xref": { "accession": "P00557", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/P00557", "label": "Escherichia coli hygromycin-B 4-O-kinase (hph) (HygR)", "url": "https://www.uniprot.org/uniprotkb/P00557/entry" } } ], "last-updated": "2025-08-14", "name-list": [ { "type": "identifier", "value": "CHSE-TOF-MX8" } ], "reference-list": [ { "resource-internal-ref": "PubMed=22405879" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "74940", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_74940", "label": "Oncorhynchus tshawytscha (Chinook salmon)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=74940&lvl=3" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_R886" } ], "age": "Embryo", "category": "Spontaneously immortalized cell line", "cell-type": { "value": "Epithelial cell", "xref": { "accession": "CL_0000066", "category": "Anatomy/cell type resources", "database": "CL", "iri": "http://purl.obolibrary.org/obo/CL_0000066", "label": "epithelial cell", "url": "https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000066" } }, "child-list": [ { "accession": { "type": "primary", "value": "CVCL_E3AL" }, "name": { "type": "identifier", "value": "CHSE-TOF-MX10" } }, { "accession": { "type": "primary", "value": "CVCL_E3AM" }, "name": { "type": "identifier", "value": "CHSE-TOF-MX8" } } ], "comment-list": [ { "category": "Miscellaneous", "value": "Cell line has been lost (personal communication of Collet, Bertrand)" }, { "category": "Characteristics", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=22089998" } } ], "value": "Transfected with the pTet-Off plasmid from the Tet On/Off Clontech system (PubMed=22089998)" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2013-11-05", "derived-from": [ { "accession": "CVCL_2780", "category": "Cell line databases/resources", "database": "Cellosaurus", "label": "CHSE-214", "url": "https://www.cellosaurus.org/CVCL_2780" } ], "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Whole embryo", "xref-list": [ { "accession": "UBERON_0000922", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0000922", "label": "embryo", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000922" } ] } } ], "entry-version": "13", "genetic-integration-list": [ { "method": "Transfection", "xref": { "accession": "P00552", "category": "Sequence databases", "database": "UniProtKB", "iri": "http://purl.uniprot.org/uniprot/P00552", "label": "Klebsiella pneumoniae transposon Tn5 neo", "url": "https://www.uniprot.org/uniprotkb/P00552/entry" } } ], "last-updated": "2025-08-14", "name-list": [ { "type": "identifier", "value": "CHSE-TOF5" }, { "type": "synonym", "value": "CHSE-TOF" } ], "reference-list": [ { "resource-internal-ref": "PubMed=22089998" }, { "resource-internal-ref": "PubMed=22405879" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "74940", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_74940", "label": "Oncorhynchus tshawytscha (Chinook salmon)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=74940&lvl=3" } ], "xref-list": [ { "accession": "Q54813320", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q54813320" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_G347" } ], "age": "Age unspecified", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Problematic cell line", "value": "Misidentified. Originally thought to be of Oncorhynchus tschawytscha origin and to be CHSE-214 but found to be from Lepomis macrochirus." }, { "category": "Group", "value": "Fish cell line" } ], "created": "2013-02-11", "entry-version": "9", "last-updated": "2023-10-05", "name-list": [ { "type": "identifier", "value": "CHSE/F" }, { "type": "synonym", "value": "CHSE-214" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "13106", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_13106", "label": "Lepomis macrochirus (Bluegill)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=13106&lvl=3" } ], "xref-list": [ { "accession": "00021714", "category": "Cell line collections (Providers)", "database": "ECACC", "url": "https://www.culturecollections.org.uk/products/celllines/detail.jsp?refId=00021714" }, { "accession": "Q54813322", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q54813322" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_CV32" } ], "age": "Age unspecified", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Group", "value": "Fish cell line" } ], "created": "2016-07-13", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Kidney", "xref-list": [ { "accession": "UBERON_0002113", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0002113", "label": "kidney", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0002113" } ] } } ], "entry-version": "10", "last-updated": "2023-10-05", "name-list": [ { "type": "identifier", "value": "CIK" }, { "type": "synonym", "value": "Ctenopharyngodon Idellus Kidney" } ], "reference-list": [ { "resource-internal-ref": "CelloPub=CLPUB00329" }, { "resource-internal-ref": 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"CL_0000056", "category": "Anatomy/cell type resources", "database": "CL", "iri": "http://purl.obolibrary.org/obo/CL_0000056", "label": "myoblast", "url": "https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000056" } }, "child-list": [], "comment-list": [ { "category": "Miscellaneous", "value": "Age of donor from personal communication of Tan, Qing-Song" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2025-11-27", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Muscle, epaxial muscle", "xref-list": [ { "accession": "UBERON_0008778", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0008778", "label": "epaxial musculature", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0008778" } ] } } ], "doubling-time-list": [ { "doubling-time-note": "At 29th passage", "doubling-time-value": "29.24 hours", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=37782384" } } ] } ], "doubling-time-range": { "max": "30", "min": "29", "unit": "hour" }, "entry-version": "1", "last-updated": "2025-11-27", "name-list": [ { "type": "identifier", "value": "CIM" }, { "type": "synonym", "value": "Ctenopharyngodon Idellus Muscle" } ], "reference-list": [ { "resource-internal-ref": "PubMed=37782384" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "7959", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_7959", "label": "Ctenopharyngodon idella (Grass carp)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=7959&lvl=3" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_A8ZF" } ], "age": "Age unspecified", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Virology", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=33460745" } } ], "value": "Susceptible to infection by grass carp reovirus (GCRV) genotype 2 (PubMed=33460745)" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2021-09-23", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Swim bladder", "xref-list": [ { "accession": "UBERON_0006860", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0006860", "label": "swim bladder", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0006860" } ] } } ], "entry-version": "6", "last-updated": "2023-10-05", "name-list": [ { "type": "identifier", "value": "CiSB" }, { "type": "synonym", "value": "Ctenopharyngodon idellus Swim Bladder" } ], "reference-list": [ { "resource-internal-ref": "PubMed=33460745" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "7959", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_7959", "label": "Ctenopharyngodon idella (Grass carp)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=7959&lvl=3" } ], "xref-list": [ { "accession": "Q108820046", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q108820046" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_4144" } ], "age": "2Y", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Group", "value": "Fish cell line" } ], "created": "2012-04-04", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Peripheral blood", "xref-list": [ { "accession": "UBERON_0000178", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0000178", "label": "blood", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000178" } ] } } ], "entry-version": "13", "last-updated": "2023-06-29", "name-list": [ { "type": "identifier", "value": "CLC [Cyprinus]" }, { "type": "synonym", "value": "Carp Leukocyte Culture" } ], "reference-list": [ { "resource-internal-ref": "PubMed=2369971" } ], "sex": "Female", "species-list": [ { "accession": "7962", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_7962", "label": "Cyprinus carpio (Common carp)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=7962&lvl=3" } ], "xref-list": [ { "accession": "CLO_0002494", "category": "Cell line databases/resources", "database": "CLO", "iri": "http://purl.obolibrary.org/obo/CLO_0002494", "url": "https://www.ebi.ac.uk/ols4/ontologies/clo/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCLO_0002494" }, { "accession": "cl791", "category": "Cell line databases/resources", "database": "CLDB", "url": "https://bioinformatics.hsanmartino.it/hypercldb/cl791.html" }, { "accession": "CRL-2763", "category": "Cell line collections (Providers)", "database": "ATCC", "discontinued": "true" }, { "accession": "95070628", "category": "Cell line collections (Providers)", "database": "ECACC", "url": "https://www.culturecollections.org.uk/products/celllines/detail.jsp?refId=95070628" }, { "accession": "Q54813575", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q54813575" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_6F77" } ], "age": "Age unspecified", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Miscellaneous", "value": "As no cell line name was provided in the paper, we assigned the name based on the abbreviation of the cell line description" }, { "category": "Group", "value": "Fish cell line" } 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] }, { "accession-list": [ { "type": "primary", "value": "CVCL_2012" } ], "age": "Age unspecified", "category": "Spontaneously immortalized cell line", "cell-type": { "value": "Fibroblast", "xref": { "accession": "CL_0000057", "category": "Anatomy/cell type resources", "database": "CL", "iri": "http://purl.obolibrary.org/obo/CL_0000057", "label": "fibroblast", "url": "https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000057" } }, "child-list": [], "comment-list": [ { "category": "Problematic cell line", "value": "Misidentified. Originally thought to be of Oncorhynchus mykiss (trout) origin but found to be from Oncorhynchus tshawytscha (DSMZ=ACC-77)." }, { "category": "Group", "value": "Fish cell line" } ], "created": "2012-04-04", "derived-from": [ { "accession": "CVCL_4607", "category": "Cell line databases/resources", "database": "Cellosaurus", "label": "R1 [Oncorhynchus]", "url": "https://www.cellosaurus.org/CVCL_4607" } ], "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Liver", "xref-list": [ { "accession": "UBERON_0002107", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0002107", "label": "liver", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0002107" } ] } } ], "doubling-time-list": [ { "doubling-time-value": "~80 hours", "source-list": [ { "xref": { "accession": "ACC-77", "category": "Cell line collections (Providers)", "database": "DSMZ", "url": "https://www.dsmz.de/collection/catalogue/details/culture/ACC-77" } } ] } ], "doubling-time-range": { "max": "80", "min": "80", "unit": "hour" }, "entry-version": "22", "last-updated": "2025-08-14", "name-list": [ { "type": "identifier", "value": "D-11" } ], "reference-list": [ { "resource-internal-ref": "PubMed=28374170" } ], "registration-list": [ { "registration-number": "ICLAC-00582", "registry": "International Cell Line Authentication Committee, Register of Misidentified Cell Lines" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "74940", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_74940", "label": "Oncorhynchus tshawytscha (Chinook salmon)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=74940&lvl=3" } ], "web-page-list": [ { "category": "Info", "institution": "ICLAC", "specifier": "-", "url": "https://iclac.org/wp-content/uploads/Cross-Contaminations_v13_distribution.xlsx" } ], "xref-list": [ { "accession": "CLO_0002660", "category": "Cell line databases/resources", "database": "CLO", "iri": "http://purl.obolibrary.org/obo/CLO_0002660", "url": "https://www.ebi.ac.uk/ols4/ontologies/clo/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCLO_0002660" }, { "accession": "cl953", "category": "Cell line databases/resources", "database": "CLDB", "url": "https://bioinformatics.hsanmartino.it/hypercldb/cl953.html" }, { "accession": "ACC-77", "category": "Cell line collections (Providers)", "database": "DSMZ", "discontinued": "true" }, { "accession": "ACC-77", "category": "Cell line databases/resources", "database": "DSMZCellDive", "url": "https://celldive.dsmz.de/celllines/ACC-77" }, { "accession": "Q54817119", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q54817119" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_C5YQ" } ], "age": "Age unspecified", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Group", "value": "Fish cell line" } ], "created": "2022-12-15", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Fin", "xref-list": [ { "accession": "UBERON_0008897", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0008897", "label": "fin", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0008897" } ] } } ], "entry-version": "5", "last-updated": "2025-04-10", "name-list": [ { "type": "identifier", "value": "DDaF-1" }, { "type": "synonym", "value": "Dario Dario Fin-1" } ], "registration-list": [ { "registration-number": "NRFC068", "registry": "National Repository of Fish Cell Line (NRFC), National Bureau of Fish Genetic Resources, India" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "248993", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_248993", "label": "Dario dario (Scarlet badis)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=248993&lvl=3" } ], "web-page-list": [ { "category": "Provider", "institution": "NRFC", "specifier": "NRFC068", "url": "https://mail.nbfgr.res.in/nrfc/cellline-available.php" } ], "xref-list": [ { "accession": "NRFC068", "category": "Cell line collections (Providers)", "database": "NRFC" }, { "accession": "Q116048830", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q116048830" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_C8GD" } ], "age": "Age unspecified", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Virology", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=37372114" } } ], "value": "Susceptible to infection by infectious spleen and kidney necrosis virus (ISKNV), red sea bream iridovirus (RSIV) and to the rhabdoviruses hirame rhabdovirus (HIRRV), spring viremia of carp virus (SVCV) and viral hemorrhagic septicemia virus (VHSV) (PubMed=37372114)" }, { "category": "Characteristics", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=37372114" } } ], "value": "Capable of growing from 25 to 30 Celsius, the optimal temperature is 28 to 30 Celsius (PubMed=37372114)" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2023-10-05", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Caudal fin", "xref-list": [ { "accession": "UBERON_4000164", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_4000164", "label": "caudal fin", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_4000164" } ] } } ], "entry-version": "2", "last-updated": "2024-01-30", "name-list": [ { "type": "identifier", "value": "DGF" }, { "type": "synonym", "value": "Dwarf Gourami Fin" } ], "reference-list": [ { "resource-internal-ref": "PubMed=37372114" } ], "registration-list": [ { "registration-number": "KCLRF-00522", "registry": "International Depositary Authority, Korean Cell Line Research Foundation" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "1749025", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_1749025", "label": "Trichogaster lalius (Dwarf gourami)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=1749025&lvl=3" } ], "xref-list": [ { "accession": "Q123031158", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q123031158" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_J028" } ], "age": "Age unspecified", "category": "Cancer cell line", "child-list": [], "comment-list": [ { "category": "Group", "value": "Fish cell line" } ], "created": "2013-02-11", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Liver", "xref-list": [ { "accession": "UBERON_0002107", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0002107", "label": "liver", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0002107" } ] } } ], "disease-list": [ { "accession": "C134571", "category": "Medical resources", "database": "NCIt", "iri": "http://purl.obolibrary.org/obo/NCIT_C134571", "label": "Medaka hepatoma", "url": "https://evsexplore.semantics.cancer.gov/evsexplore/concept/ncit/C134571" } ], "entry-version": "11", "last-updated": "2023-10-05", "name-list": [ { "type": "identifier", "value": "DIT29" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "8090", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_8090", "label": "Oryzias latipes (Japanese rice fish)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=8090&lvl=3" } ], "xref-list": [ { "accession": "CLO_0051618", "category": "Cell line databases/resources", "database": "CLO", "iri": "http://purl.obolibrary.org/obo/CLO_0051618", "url": "https://www.ebi.ac.uk/ols4/ontologies/clo/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCLO_0051618" }, { "accession": "RCB2945", "category": "Cell line collections (Providers)", "database": "RCB", "url": "https://cellbank.brc.riken.jp/cell_bank/CellInfo/?cellNo=RCB2945&lang=En" }, { "accession": "Q54831101", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q54831101" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_HG31" } ], "age": "Age unspecified", "category": "Transformed cell line", "child-list": [], 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Little/no growth at 21 Celsius; reduced growth at 26 and 32 Celsius (PubMed=40957357)" }, { "category": "Group", "value": "Fish cell line" } ], "created": "2025-11-27", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Skeletal muscle", "xref-list": [ { "accession": "UBERON_0001134", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0001134", "label": "skeletal muscle tissue", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0001134" } ] } } ], "doubling-time-list": [ { "doubling-time-note": "At 8th passage", "doubling-time-value": "29 hours", "source-list": [ { "reference": { "resource-internal-ref": "PubMed=40957357" } } ] } ], "doubling-time-range": { "max": "29", "min": "29", "unit": "hour" }, "entry-version": "1", "last-updated": "2025-11-27", "name-list": [ { "type": "identifier", "value": "ESM" }, { "type": "synonym", "value": "Etroplus Suratensis Muscle" } ], "reference-list": [ { "resource-internal-ref": "PubMed=40957357" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "238232", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_238232", "label": "Etroplus suratensis (Green chromide)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=238232&lvl=3" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_6E07" } ], "age": "Blastocyst stage", "category": "Embryonic stem cell", "cell-type": { "value": "Embryonic stem cell", "xref": { "accession": "CL_0002322", "category": "Anatomy/cell type resources", "database": "CL", "iri": "http://purl.obolibrary.org/obo/CL_0002322", "label": "embryonic stem cell", "url": "https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0002322" } }, "child-list": [], "comment-list": [ { "category": "Group", "value": "Fish cell line" } ], "created": "2016-02-23", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Blastocyst", "xref-list": [ { "accession": "UBERON_0000358", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0000358", "label": "blastocyst", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000358" } ] } } ], "entry-version": "6", "last-updated": "2023-06-29", "name-list": [ { "type": "identifier", "value": "ESSA1" }, { "type": "synonym", "value": "Embryonic Stem-like cell Sparus Aurata 1" } ], "reference-list": [ { "resource-internal-ref": "PubMed=22903186" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "8175", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_8175", "label": "Sparus aurata (Gilthead sea bream)", "url": 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"accession-list": [ { "type": "primary", "value": "CVCL_R875" } ], "age": "Embryo", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Group", "value": "Fish cell line" } ], "created": "2013-11-05", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Gastrula", "xref-list": [ { "accession": "UBERON_0004734", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0004734", "label": "gastrula", "url": "https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0004734" } ] } } ], "entry-version": "11", "last-updated": "2023-06-29", "name-list": [ { "type": "identifier", "value": "FEC" }, { "type": "synonym", "value": "Flounder Embryonic Cell line" } ], "reference-list": [ { "resource-internal-ref": "CelloPub=CLPUB00053" }, { "resource-internal-ref": "PubMed=15521323" } ], "sex": "Sex unspecified", "species-list": [ { "accession": "8255", "category": "Taxonomy", "database": "NCBI_TaxID", "iri": "http://purl.obolibrary.org/obo/NCBITaxon_8255", "label": "Paralichthys olivaceus (Bastard halibut)", "url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=8255&lvl=3" } ], "xref-list": [ { "accession": "Q54834736", "category": "Encyclopedic resources", "database": "Wikidata", "url": "https://www.wikidata.org/wiki/Q54834736" } ] }, { "accession-list": [ { "type": "primary", "value": "CVCL_R897" } ], "age": "Age unspecified", "category": "Spontaneously immortalized cell line", "child-list": [], "comment-list": [ { "category": "Group", "value": "Fish cell line" } ], "created": "2013-11-05", "derived-from-site-list": [ { "site": { "site-type": "In situ", "value": "Fin", "xref-list": [ { "accession": "UBERON_0008897", "category": "Anatomy/cell type resources", "database": "UBERON", "iri": "http://purl.obolibrary.org/obo/UBERON_0008897", "label": "fin", "url": 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